Skip to content
Docs
Agents
CLI
Config
Database
Formats
Schema
Sites
Skills
Themes
Workflows
Tests
File
Docs
Agents
Creating
Using
Configuration
Tools
File
Shell
Bioinformatics
Chemistry
Cloud
Containers
Core
Database
Datasets
Environments
Geospatial
HPC
Latex
Machine Learning
Notebooks
Packages
Scientific
System
Workflows
Web
CLI
Create & Setup
New
Init
Config
Get
Set
Unset
Check
Document Management
Status
Move
Track
Untrack
Clean
Format & Sync
Convert
Merge
Sync
Push
Pull
Watch
Unwatch
Processing
Compile
Lint
Execute
Render
Query
View & Publish
Open
Publish
Zenodo
Ghost
Stencila
Demo
Resources
Outputs
List
Add
Remove
Push
Database
Init
Push
Pull
Status
Log
Verify
Reset
Snapshot
Clean
Gc
Prompts
List
Show
Infer
Update
Reset
Models
List
Run
Kernels
List
Info
Packages
Execute
Evaluate
Linters
List
Lint
Formats
List
Structuring
Themes
List
Show
New
Remove
Validate
Tokens
Secrets
List
Set
Delete
Tools
List
Show
Install
Env
Run
Server
Serve
Snap
Lsp
Cloud
Cloud
Status
Signin
Signout
Logs
Site
Show
List
Add
Remove
Render
Preview
Push
Access
Team
Password
Reviews
On
Off
Config
Uploads
On
Off
Config
Domain
Set
Status
Clear
Branch
List
Delete
Signin
Signout
Logs
Maintenance
Upgrade
Uninstall
Config
Workspace
Remotes
Outputs
Site
Logo
Layout
Header
Left Sidebar
Top
Bottom
Right Sidebar
Footer
Responsive
Components
Logo
Title
Breadcrumbs
Nav Tree
Nav Menu
Nav Groups
Toc Tree
Prev Next
Color Mode
Copyright
Social Links
Edit Source
Edit On
Copy Markdown
Site Search
Glide
Search
Reviews
Uploads
Remotes
Actions
Auto Index
Agents
Database
Sync
Troubleshooting
Under The Hood
Formats
Markdown
CommonMark
Stencila Markdown
MyST Markdown
Quarto Markdown
LLM Markdown
Markup
DOM HTML
HTML
JATS
Typesetting
LaTeX
TeX
RNW
PDF
Plain Text
Notebooks
Jupyter Notebook
Word Processors
Word DOCX
Open Office ODT
Data & Spreadsheets
CSV
TSV
Excel XLSX
Excel XLS
Open Office ODS
Bibliographies
CSL-JSON
CFF
Email
Email HTML
MJML
Images
PNG
Archives & Bundles
MECA
PMC OA
Serialization
JSON
JSON5
JSON-LD
JSON+Zip
CBOR
CBOR+Zstd
YAML
Interoperability
AT Protocol JSON
OXA JSON
Pandoc JSON
Lexical JSON
Koenig JSON
Schema
Works
Agent
Article
Audio Object
Author
Author Role
Author Role Author
Author Role Name
Bibliography
Chat
Chat Message
Chat Message Group
Claim
Claim Type
Collection
Comment
Creative Work
Creative Work Type
Creative Work Variant
Directory
Figure
File
Horizontal Alignment
Image Object
Instruction Type
Label Type
Media Object
Periodical
Prompt
Publication Issue
Publication Volume
Reference
Review
Skill
Software Application
Software Source Code
Supplement
Table
Table Cell
Table Cell Type
Table Row
Table Row Type
Vertical Alignment
Video Object
Workflow
Prose
Admonition
Admonition Type
Annotation
Appendix Break
Block
Citation
Citation Group
Citation Intent
Citation Mode
Defined Term
Emphasis
Heading
Icon
Inline
Inlines Block
Link
List
List Item
List Order
Mark
Note
Note Type
Paragraph
Quote Block
Quote Inline
Section
Section Type
Sentence
Strikeout
Strong
Subscript
Superscript
Text
Thematic Break
Underline
Math
Math
Math Block
Math Inline
Code
Code Block
Code Chunk
Code Executable
Code Expression
Code Inline
Code Static
Compilation Message
Execution Message
Data
Array
Array Hint
Array Validator
Boolean
Boolean Validator
Constant Validator
Cord
Datatable
Datatable Column
Datatable Column Hint
Datatable Hint
Date
Date Time
Date Time Validator
Date Validator
Duration
Duration Validator
Enum Validator
Hint
Integer
Integer Validator
Null
Number
Number Validator
Object
Object Hint
Primitive
String
String Hint
String Validator
Time
Time Unit
Time Validator
Timestamp
Timestamp Validator
Tuple Validator
Unknown
Unsigned Integer
Validator
Flow
Button
Call Argument
Call Block
Code Location
Compilation Digest
Executable
Execution Bounds
Execution Dependant
Execution Dependant Relation
Execution Dependency
Execution Dependency Relation
Execution Mode
Execution Required
Execution Status
Execution Tag
For Block
Form
Form Derive Action
Function
If Block
If Block Clause
Include Block
Parameter
Variable
Walkthrough
Walkthrough Step
Style
Page
Styled
Styled Block
Styled Inline
Edits
Instruction
Instruction Block
Instruction Inline
Instruction Message
Message Part
Prompt Block
Suggestion
Suggestion Block
Suggestion Inline
Suggestion Status
Other
Brand
Contact Point
Entity
Enumeration
Excerpt
Grant
Island
Message Level
Message Role
Model Parameters
Monetary Grant
Node
Organization
Person
Postal Address
Product
Property Value
Provenance Category
Provenance Count
Raw Block
Relative Position
Role
Thing
Thing Variant
Sites
Redirects
Skills
Creating
Using
Configuration
Themes
Targets
Email
Pdf
Python
R
Web
Word
Tokens
Fonts
Nodes
Admonitions
Breadcrumbs
Breaks
Citations
Code
Datatables
Diagrams
Figures
Headings
Images
Links
Lists
Math
Paragraphs
Plots
Quotes
References
Tables
Works
Print
Site
Copy Markdown
Copyright
Edit On
Edit Source
Layout
Logo
Nav Groups
Nav Menu
Nav Tree
Prev Next
Site Review
Site Search
Social Links
Title
Toc Tree
Workflows
Creating
Using
Configuration
Pipelines
Tests
File
Spread
Earth
North
South
Sea
North
South
Sky
North
South
Home
Docs
Formats
Notebooks
Notebooks
Jupyter Notebook
Previous
Text
Next
Ipynb
Copy as Markdown
Docs
Agents
CLI
Config
Database
Formats
Schema
Sites
Skills
Themes
Workflows
Tests
File
©
2026
Stencila
